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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1371FIG00439895 hypothetical protein. (294 aa)    
Predicted Functional Partners:
BF49_1368
4hydroxybenzoylCoA reductase alpha subunit EC 139920.
 
     0.850
BF49_1367
4hydroxybenzoylCoA reductase alpha subunit EC 139920.
 
     0.826
BF49_1364
FIG00440581 hypothetical protein.
 
     0.822
BF49_1363
FIG00441021 hypothetical protein.
 
     0.821
BF49_1362
Signal recognition particle receptor protein FtsY alpha subunit TC 3A511.
 
     0.812
BF49_1365
Putative subunit of hydroxybenzoyl reductase.
 
     0.808
BF49_1369
Carbon monoxide dehydrogenase D protein.
       0.798
BF49_1370
Carbon monoxide dehydrogenase E protein.
       0.798
BF49_1372
FIG00444702 hypothetical protein.
 
     0.798
BF49_1366
4hydroxybenzoylCoA reductase gamma subunit EC 139920.
       0.779
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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