Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1376Mll2313 protein. (214 aa)    
Predicted Functional Partners:
BF49_1377
Dehydrogenase.
 
     0.952
BF49_1380
Maltosemaltodextrin ABC transporter substrate binding periplasmic protein MalE.
 
     0.879
BF49_1375
Novel Xylose regulator from LacI family.
 
     0.837
BF49_4884
Trehalose synthase EC 549916.
   
    0.811
BF49_1379
Multiple sugar ABC transporter membranespanning permease protein MsmF.
 
     0.777
BF49_1378
ABCtype sugar transport system permease component.
 
     0.774
glgA
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.724
glgA-2
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.724
BF49_1842
GLUCOSEFRUCTOSE OXIDOREDUCTASE EC 119928.
 
     0.659
BF49_1840
Sugar phosphate isomerasesepimerase.
 
   
 0.623
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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