Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1377Dehydrogenase. (365 aa)    
Predicted Functional Partners:
BF49_1376
Mll2313 protein.
 
     0.952
BF49_1380
Maltosemaltodextrin ABC transporter substrate binding periplasmic protein MalE.
 
   
 0.894
BF49_1375
Novel Xylose regulator from LacI family.
 
  
 0.824
BF49_1379
Multiple sugar ABC transporter membranespanning permease protein MsmF.
 
   
 0.794
BF49_1378
ABCtype sugar transport system permease component.
 
     0.785
BF49_1840
Sugar phosphate isomerasesepimerase.
 
 
 0.779
BF49_1333
Inosose dehydratase EC 42144.
 
 
 0.719
BF49_6193
Myoinositol 2dehydrogenase 1 EC 11118.
  
     0.667
BF49_1841
Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism.
 
   
 0.603
BF49_1334
Epiinositol hydrolase EC 371; Belongs to the TPP enzyme family.
 
  
 0.592
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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