Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1380Maltosemaltodextrin ABC transporter substrate binding periplasmic protein MalE. (427 aa)    
Predicted Functional Partners:
BF49_1378
ABCtype sugar transport system permease component.
 
 0.993
BF49_1379
Multiple sugar ABC transporter membranespanning permease protein MsmF.
 
 0.993
BF49_1138
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Belongs to the ABC transporter superfamily.
  
 0.948
BF49_6717
ABC transporter ATPbinding protein; Belongs to the ABC transporter superfamily.
  
 0.948
BF49_6936
Maltosemaltodextrin transport ATPbinding protein MalK EC 36319 Multiple sugar ABC transporter ATPbinding protein.
  
 0.948
BF49_1377
Dehydrogenase.
 
   
 0.894
BF49_1376
Mll2313 protein.
 
     0.879
BF49_1375
Novel Xylose regulator from LacI family.
 
 
 0.850
BF49_6718
ABCtype sugar transport system permease component.
 
 0.763
BF49_6719
Probable permease of ABC sugar transporter.
 
 0.758
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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