Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1385Polysaccharide biosynthesis associated protein. (448 aa)    
Predicted Functional Partners:
BF49_6587
Probable glycosyl transferase.
 
  
 0.865
BF49_2511
dTDP4dehydrorhamnose 35epimerase EC 51313; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.793
BF49_2513
dTDPglucose 46dehydratase EC 42146; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.792
BF49_6586
FIG00442552 hypothetical protein.
 
  
 0.755
BF49_5782
Flagellar hookassociated protein FlgL.
  
     0.739
BF49_0652
FIG01007117 hypothetical protein.
  
     0.717
BF49_6589
Lipopolysaccharide biosynthesis.
 
  
 0.717
BF49_3099
Hypothetical protein.
 
  
 0.715
BF49_3106
Succinoglycan biosynthesis transport protein.
 
  
 0.705
BF49_6592
Mlr8448 protein.
 
   
 0.695
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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