STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1389Stress responsive alphabeta barrel domain protein Dabb. (107 aa)    
Predicted Functional Partners:
BF49_1390
Alcohol dehydrogenase EC 1111.
 
     0.822
BF49_1391
Bll2681 protein.
 
     0.821
BF49_1393
Catechol 12dioxygenase EC 113111.
 
     0.734
BF49_1392
3hydroxyisobutyrate dehydrogenase.
  
    0.730
BF49_1388
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
 
   
 0.605
BF49_1280
Similar to flavohemoprotein.
  
 
  0.566
BF49_1399
YciL protein.
 
    0.554
polA
DNA polymerase I EC 2777; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
    0.536
BF49_1395
Ribose ABC transport system ATPbinding protein RbsA TC 3A121.
  
  
 0.526
BF49_1397
Ribose ABC transport system permease protein RbsC TC 3A121; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.521
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.