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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1390Alcohol dehydrogenase EC 1111. (359 aa)    
Predicted Functional Partners:
BF49_1393
Catechol 12dioxygenase EC 113111.
  
 0.996
BF49_1887
Catechol 12dioxygenase EC 113111.
  
 0.994
BF49_2305
Dienelactone hydrolase family.
  
 
 0.968
BF49_7316
Dienelactone hydrolase family.
  
 
 0.968
BF49_4833
Dienelactone hydrolase family.
  
 
 0.952
BF49_2977
Dienelactone hydrolase family.
  
 
 0.945
BF49_4675
Hypothetical protein.
  
 
 0.933
BF49_7192
Alcohol dehydrogenase EC 1111.
  
  
 
0.924
BF49_3257
FIG00440381 hypothetical protein.
     
 0.903
BF49_5253
Betaketoadipate enollactone hydrolase EC 31124.
     
 0.903
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.