Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_1398ABC transporter sugarbinding protein. (324 aa)    
Predicted Functional Partners:
BF49_1395
Ribose ABC transport system ATPbinding protein RbsA TC 3A121.
 
 0.976
BF49_2019
Xylose ABC transporter periplasmic xylosebinding protein XylF.
  
  
  0.966
BF49_1397
Ribose ABC transport system permease protein RbsC TC 3A121; Belongs to the binding-protein-dependent transport system permease family.
 0.963
BF49_1396
Sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.962
BF49_3900
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.941
BF49_2018
Dxylose transport ATPbinding protein XylG.
 
 0.936
BF49_1482
Putative sugar ABC transport system permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 
 0.934
BF49_1483
Putative sugar ABC transport system permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family.
 
 0.934
BF49_1997
Dxylose transport ATPbinding protein XylG.
 
 0.934
BF49_1484
Putative sugar ABC transport system ATPbinding protein YtfR EC 36317.
 
 0.931
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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