Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1399YciL protein. (95 aa)    
Predicted Functional Partners:
BF49_6546
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  0.715
BF49_1398
ABC transporter sugarbinding protein.
       0.564
BF49_6209
Possible phosphoheptose isomerase.
   
    0.564
hisE
PhosphoribosylATP pyrophosphatase EC 36131.
  
    0.559
BF49_3338
PhosphoribosylATP pyrophosphatase EC 36131; Belongs to the PRA-PH family.
  
    0.559
BF49_1389
Stress responsive alphabeta barrel domain protein Dabb.
 
    0.554
tatA
Twinarginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
    0.540
yacG
Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
   
    0.503
BF49_1393
Catechol 12dioxygenase EC 113111.
 
     0.486
BF49_1395
Ribose ABC transport system ATPbinding protein RbsA TC 3A121.
       0.471
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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