STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1399YciL protein. (95 aa)    
Predicted Functional Partners:
BF49_6546
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
  0.665
BF49_6209
Possible phosphoheptose isomerase.
   
    0.573
BF49_1398
ABC transporter sugarbinding protein.
       0.566
BF49_1389
Stress responsive alphabeta barrel domain protein Dabb.
 
    0.554
tatA
Twinarginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
    0.531
hisE
PhosphoribosylATP pyrophosphatase EC 36131.
  
    0.503
BF49_3338
PhosphoribosylATP pyrophosphatase EC 36131; Belongs to the PRA-PH family.
  
    0.503
BF49_1393
Catechol 12dioxygenase EC 113111.
 
     0.491
BF49_1394
DLactate dehydrogenase cytochrome cdependent EC 1124.
       0.471
BF49_1395
Ribose ABC transport system ATPbinding protein RbsA TC 3A121.
       0.471
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.