Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1404Peptide/nickel transport system substrate-binding protein; Dipeptidebinding ABC transporter periplasmic substratebinding component TC 3A152 Putative heminbinding lipoprotein. (533 aa)    
Predicted Functional Partners:
BF49_1402
Dipeptide transport system permease protein DppC TC 3A152.
 
 0.959
BF49_1403
Dipeptide transport system permease protein DppB TC 3A152.
 
 0.950
BF49_1400
Oligopeptide transport ATPbinding protein OppF TC 3A151; Belongs to the ABC transporter superfamily.
  
 0.848
BF49_6952
Cell processes transport of small molecules amino acids amines peptides.
  
  
  0.840
BF49_1401
Oligopeptide transport system permease protein OppB TC 3A151; Belongs to the ABC transporter superfamily.
 
 0.835
BF49_6053
Dipeptide transport system permease protein DppB TC 3A152.
 
 0.803
BF49_6052
Dipeptide transport system permease protein DppC TC 3A152.
 
 0.797
BF49_1406
Dipeptide transport system permease protein DppC TC 3A152 Putative hemine transporter ATPbinding subunit.
 
 0.778
BF49_1407
Dipeptide transport system permease protein DppB TC 3A152.
 
 0.768
BF49_1408
Peptide/nickel transport system substrate-binding protein; Dipeptidebinding ABC transporter periplasmic substratebinding component TC 3A152 Putative heminbinding lipoprotein.
 
  
 
0.758
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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