Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_14103oxoacylacylcarrier protein reductase EC 111100. (249 aa)    
Predicted Functional Partners:
BF49_1411
Putative UDPglucose 4epimerase EC5132.
 
 
   0.822
BF49_1409
Oxidoreductase.
  
   0.805
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.783
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.766
BF49_6971
Hypothetical protein.
  
 0.757
BF49_1412
Dhydantoinase EC 3522.
   
   0.745
BF49_5178
InterPro IPR002198IPR002347 COGs COG1028; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.723
BF49_5306
TPR repeat.
  
 0.659
BF49_1413
Hydantoin racemase EC 5199.
       0.542
BF49_1408
Peptide/nickel transport system substrate-binding protein; Dipeptidebinding ABC transporter periplasmic substratebinding component TC 3A152 Putative heminbinding lipoprotein.
       0.518
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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