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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1416Aminotransferase class III. (431 aa)    
Predicted Functional Partners:
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.841
BF49_1418
Nmethylhydantoinase A EC 35214.
     
 0.792
BF49_1417
Nmethylhydantoinase B EC 35214.
       0.790
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 
 0.780
BF49_1415
NcarbamoylDamino acid hydrolase EC 35177 putative.
  
 
 0.736
BF49_2793
Proline dehydrogenase EC 15998 Proline oxidase Delta1pyrroline5carboxylate dehydrogenase EC 15112; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.702
BF49_6971
Hypothetical protein.
  
 0.690
BF49_0563
Aspartokinase EC 2724; Belongs to the aspartokinase family.
    
 0.661
BF49_5786
Bll5848 putative decarboxylase.
  
 0.649
BF49_5796
Bll5848 putative decarboxylase.
  
 0.649
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.