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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1428Cobalamin biosynthesis protein CobE. (122 aa)    
Predicted Functional Partners:
BF49_1427
Cobaltprecorrin4 C11methyltransferase EC 211133; Belongs to the precorrin methyltransferase family.
 
 
 0.998
BF49_1429
Precorrin-6Y C5,15-methyltransferase (decarboxylating); Cobaltprecorrin6y C5methyltransferase EC 211 Cobaltprecorrin6y C15methyltransferase decarboxylating EC 211.
 
 
 0.997
BF49_1430
Cobaltprecorrin6x reductase EC 13154.
 
 
 0.985
BF49_1423
Precorrin6A synthase EC 211152; Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.
 
 
 0.983
BF49_1431
Cobaltprecorrin3b C17methyltransferase.
 
 
 0.973
BF49_1432
Cobaltprecorrin2 C20methyltransferase EC 211130; Belongs to the precorrin methyltransferase family.
 
 
 0.972
BF49_1433
Cobaltprecorrin8x methylmutase EC 5412.
 
 
 0.970
cobB
Cobyrinic acid ACdiamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.963
BF49_1424
Predicted cobalt transporter CbtC.
 
  
 0.921
BF49_1425
UroporphyrinogenIII methyltransferase EC 211107; Belongs to the precorrin methyltransferase family.
 
  
 0.912
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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