Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1466Transcriptional regulator of mannitol utilization DeoR family protein. (316 aa)    
Predicted Functional Partners:
BF49_1467
Putative phosphatase YieH.
 
     0.868
BF49_1465
Various polyols ABC transporter periplasmic substratebinding protein.
 
   
 0.837
BF49_1463
Various polyols ABC transporter permease component 2.
 
   
 0.835
BF49_1464
Various polyols ABC transporter permease component 1.
 
   
 0.739
BF49_1468
Nitric oxide reductase activation protein NorD.
       0.575
BF49_1469
Nitric oxide reductase activation protein NorQ.
       0.571
BF49_4837
Dmannonate oxidoreductase EC 11157.
 
   
 0.515
BF49_4301
NADPHdependent glyceraldehyde3phosphate dehydrogenase EC 12113 NADdependent glyceraldehyde3phosphate dehydrogenase EC 12112; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.488
BF49_1460
Dribulokinase EC 27147.
 
     0.479
xylB
Xylulose kinase EC 27117.
 
  
 0.475
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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