STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1486Predicted 2keto3deoxyxylonate dehydratase. (390 aa)    
Predicted Functional Partners:
BF49_1480
Uncharacterized oxidoreductase ydgJ EC 1.
 
     0.704
BF49_1371
FIG00439895 hypothetical protein.
 
   
 0.590
BF49_1865
Gluconolactonase EC 31117.
 
   
 0.547
BF49_1312
Gluconolactonase EC 31117.
 
   
 0.546
BF49_1866
Gluconolactonase EC 31117.
 
   
 0.535
BF49_1736
Gluconolactonase EC 31117.
 
   
 0.530
BF49_1487
HEAT repeatcontaining protein.
       0.521
BF49_1488
Adenylylsulfate reductase betasubunit EC 18992.
       0.521
BF49_1478
14lactonase EC 31125.
 
   
 0.504
BF49_3903
Lfuconolactone hydrolase.
 
   
 0.503
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.