Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1509Sulfopyruvate decarboxylase alpha subunit EC 41179. (188 aa)    
Predicted Functional Partners:
BF49_1510
Sulfopyruvate decarboxylase beta subunit EC 41179.
 
  
  0.973
BF49_1837
Sulfopyruvate decarboxylase beta subunit EC 41179.
 
  
  0.874
BF49_4848
Sulfopyruvate decarboxylase beta subunit EC 41179.
 
     0.792
BF49_2315
Hypothetical protein.
  
    0.765
BF49_6304
Glyoxalasebleomycin resistance proteindioxygenase.
  
     0.618
BF49_1980
Hypothetical protein.
  
     0.615
BF49_2050
Molybdopterin oxidoreductase ironsulfur binding subunit EC 127.
   
  
 0.573
BF49_0917
NADdependent malic enzyme EC 11138.
   
    0.571
BF49_3893
Immunogenic protein.
  
     0.570
nadX
LAspartate dehydrogenase EC 14121; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
  
     0.562
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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