Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1514Hydroxypyruvate isomerase EC 53122; Belongs to the hyi family. (261 aa)    
Predicted Functional Partners:
BF49_1515
Glyoxylate carboligase EC 41147; Belongs to the TPP enzyme family.
 
 
 0.991
BF49_1513
2hydroxy3oxopropionate reductase EC 11160.
 
 0.990
BF49_4361
D3phosphoglycerate dehydrogenase EC 11195.
  
 
  0.920
BF49_4940
D3phosphoglycerate dehydrogenase EC 11195.
  
 
  0.917
BF49_0069
Glyoxylate reductase EC 11179 Glyoxylate reductase EC 11126 Hydroxypyruvate reductase EC 11181; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.907
BF49_0473
Serineglyoxylate aminotransferase EC 26145.
     
  0.900
BF49_5632
Serineglyoxylate aminotransferase EC 26145.
     
  0.900
BF49_1761
FIG00641944 hypothetical protein.
 
 
 0.757
BF49_5539
3hydroxyisobutyrate dehydrogenase EC 11131.
 
 
 0.540
BF49_1763
2hydroxy3oxopropionate reductase EC 11160.
 
 
 0.523
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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