Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1515Glyoxylate carboligase EC 41147; Belongs to the TPP enzyme family. (596 aa)    
Predicted Functional Partners:
BF49_1513
2hydroxy3oxopropionate reductase EC 11160.
 
 
 0.998
BF49_1514
Hydroxypyruvate isomerase EC 53122; Belongs to the hyi family.
 
 
 0.991
BF49_3073
Glycolate dehydrogenase EC 119914 ironsulfur subunit GlcF.
     
 0.985
BF49_3074
Glycolate dehydrogenase EC 119914 FADbinding subunit GlcE.
     
  0.958
BF49_3075
Glycolate dehydrogenase EC 119914 subunit GlcD.
     
  0.937
glcB
Malate synthase G EC 2339; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
    
 0.932
BF49_1580
Acetolactate synthase large subunit EC 2216; Belongs to the TPP enzyme family.
  
  
 
0.921
BF49_1727
Acetolactate synthase large subunit EC 2216; Belongs to the TPP enzyme family.
  
  
 
0.921
BF49_4844
Acetolactate synthase large subunit EC 2216; Belongs to the TPP enzyme family.
  
  
 
0.918
BF49_2345
Isocitrate lyase EC 4131.
     
 0.917
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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