STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1520Transcriptional regulator associated with Tricarboxylic transport. (242 aa)    
Predicted Functional Partners:
BF49_1521
Glyoxylate carboligase EC 41147; Belongs to the TPP enzyme family.
 
     0.744
BF49_0464
Predicted biotin regulatory protein BioR GntR family.
  
     0.717
BF49_1858
Transcriptional regulator GntR family.
  
     0.702
frc
Formylcoenzyme A transferase EC 28316; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.
 
     0.676
BF49_1534
Oxalateformate antiporter.
  
     0.600
BF49_1535
Putative oxalateformate antiporter.
  
   
 0.553
BF49_4838
Transcriptional regulator NanR.
 
  
 0.549
BF49_6080
Transcriptional regulator GntR family.
  
     0.515
BF49_3240
Transcriptional regulator GntR family.
  
     0.498
BF49_1518
Transcriptional regulator IclR family.
 
    0.470
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.