Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1550NADdependent formate dehydrogenase alpha subunit. (961 aa)    
Predicted Functional Partners:
BF49_1548
NADdependent formate dehydrogenase gamma subunit.
 
 0.999
BF49_1549
NADdependent formate dehydrogenase beta subunit.
 
 0.999
BF49_1552
NADdependent formate dehydrogenase delta subunit.
 
 0.999
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
  
 0.993
fdhD
Formate dehydrogenase chain D EC 1212; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 
 0.961
purU
Formyltetrahydrofolate deformylase EC 35110; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.935
BF49_2050
Molybdopterin oxidoreductase ironsulfur binding subunit EC 127.
  
 
 0.928
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
  
 0.919
BF49_6644
NADHubiquinone oxidoreductase chain F EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
 
 0.914
nuoI
NADHubiquinone oxidoreductase chain I EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.913
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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