STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1552NADdependent formate dehydrogenase delta subunit. (77 aa)    
Predicted Functional Partners:
BF49_1548
NADdependent formate dehydrogenase gamma subunit.
 
 
 0.999
BF49_1549
NADdependent formate dehydrogenase beta subunit.
 
 
 0.999
BF49_1550
NADdependent formate dehydrogenase alpha subunit.
 
 0.999
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
   
 0.994
BF49_2623
Tungstencontaining formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.993
fdhD
Formate dehydrogenase chain D EC 1212; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.950
BF49_1875
Assimilatory nitrate reductase large subunit EC17994; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.910
BF49_5404
Sformylglutathione hydrolase EC 31212; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.910
purU
Formyltetrahydrofolate deformylase EC 35110; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
 0.904
frc
Formylcoenzyme A transferase EC 28316; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.
     
  0.900
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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