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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1575Thymidine phosphorylase EC 2424. (513 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase EC 2429; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.963
upp-2
Uracil phosphoribosyltransferase EC 2429; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.963
BF49_1576
Ribosephosphate pyrophosphokinase EC 2761; Belongs to the ribose-phosphate pyrophosphokinase family.
 
   
 0.957
deoB
Phosphopentomutase EC 5427; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
 
 0.955
BF49_6761
Cytosine deaminase EC 3541.
     
  0.936
surE
5nucleotidase SurE EC 3135; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.931
BF49_1577
Metallobetalactamase family protein RNAspecific.
    0.926
BF49_1194
Cytosine deaminase EC 3541.
    
 0.923
BF49_2072
5nucleotidase EC 3135; Belongs to the 5'-nucleotidase family.
    
 0.915
phnN
ATPbinding protein PhnN Guanylate kinase EC 2748; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
   
  0.886
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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