STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1575Thymidine phosphorylase EC 2424. (513 aa)    
Predicted Functional Partners:
deoB
Phosphopentomutase EC 5427; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
 
 0.977
BF49_1576
Ribosephosphate pyrophosphokinase EC 2761; Belongs to the ribose-phosphate pyrophosphokinase family.
 
   
 0.953
BF49_1577
Metallobetalactamase family protein RNAspecific.
    0.945
upp
Uracil phosphoribosyltransferase EC 2429; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
    
 0.942
upp-2
Uracil phosphoribosyltransferase EC 2429; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
    
 0.942
BF49_6761
Cytosine deaminase EC 3541.
     
 0.938
BF49_1194
Cytosine deaminase EC 3541.
    
 0.927
surE
5nucleotidase SurE EC 3135; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.921
BF49_2072
5nucleotidase EC 3135; Belongs to the 5'-nucleotidase family.
    
 0.915
BF49_2234
COG1896 Predicted hydrolases of HD superfamily.
    
  0.903
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.