Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1577Metallobetalactamase family protein RNAspecific. (531 aa)    
Predicted Functional Partners:
BF49_1575
Thymidine phosphorylase EC 2424.
    0.945
BF49_0605
Hypothetical protein.
   
 0.858
BF49_1638
Bll3052 protein.
    
 0.838
BF49_3193
Highaffnity carbon uptake protein HatHatR.
    
 0.838
BF49_1576
Ribosephosphate pyrophosphokinase EC 2761; Belongs to the ribose-phosphate pyrophosphokinase family.
 
   
 0.831
polA
DNA polymerase I EC 2777; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.737
BF49_5589
SerThr protein phosphatase family protein.
  
 0.658
BF49_1579
Cation transport ATPase.
 
 0.645
BF49_0441
DEADDEAH box helicaselike protein.
   
 0.629
BF49_1050
COG0553 Superfamily II DNARNA helicases SNF2 family.
   
 0.629
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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