Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1583Conserved protein of unknown function putative YcgN protein; Belongs to the UPF0260 family. (171 aa)    
Predicted Functional Partners:
BF49_1582
Major facilitator superfamily transporter.
       0.480
BF49_1586
HYPOTHETICAL TRANSMEMBRANE PROTEIN.
       0.470
BF49_1587
Mll7655 protein.
       0.470
BF49_1584
Hypothetical protein.
       0.468
BF49_0713
3hydroxyacylacylcarrierprotein dehydratase FabA form EC 42159.
 
     0.464
fabA
3hydroxyacylacylcarrierprotein dehydratase FabA form EC 42159; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
 
     0.454
rnd
Ribonuclease D EC 31263; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
 
     0.448
BF49_1585
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
       0.444
BF49_7015
Nucleoside triphosphate pyrophosphohydrolase MazG EC 3618.
  
     0.442
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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