Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1593Hypothetical protein. (219 aa)    
Predicted Functional Partners:
BF49_1594
FIG00440335 hypothetical protein.
       0.773
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
  
 0.757
BF49_1592
Y14336 putative extracellular protein containing predicted 35aa signal peptide.
       0.751
BF49_1595
Hypothetical protein.
       0.732
BF49_1627
FIG00852424 hypothetical protein.
  
     0.702
eno
Enolase EC 42111; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.698
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
  
 0.697
BF49_5646
Hypothetical protein.
  
     0.598
BF49_3166
FIG00440130 hypothetical protein.
  
     0.561
BF49_5338
Putative esterase.
  
     0.544
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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