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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1607FIG030567 hypothetical protein. (91 aa)    
Predicted Functional Partners:
BF49_1222
FIG00845751 hypothetical protein.
 
     0.801
BF49_1223
6hydroxynicotinate reductase EC 1371.
 
     0.801
BF49_1213
Adenine deaminase EC 3542.
 
     0.795
BF49_1603
Transcriptional regulator ArsR family.
       0.705
BF49_1604
Arsenate reductase EC 12041; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.705
BF49_1605
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.705
BF49_1606
Arsenate reductase EC 12041.
       0.705
BF49_1216
Transcriptional regulator MarR family.
 
     0.666
BF49_1219
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
     0.598
BF49_1220
Branchedchain amino acidbinding protein.
 
     0.578
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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