Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1608Hydrogen peroxideinducible genes activator. (201 aa)    
Predicted Functional Partners:
BF49_5646
Hypothetical protein.
  
     0.729
BF49_0994
FIG00440764 hypothetical protein.
  
     0.725
BF49_3228
Transcriptional regulator TetR family.
  
 
   0.697
BF49_6409
FIG00443059 hypothetical protein.
  
     0.676
BF49_5103
FIG00441989 hypothetical protein.
  
     0.672
BF49_0120
OstAlike protein.
  
     0.671
BF49_5653
Putative glycosyl transferase.
  
     0.647
BF49_6892
FIG01265301 hypothetical protein.
  
     0.628
BF49_0361
FIG00440135 hypothetical protein.
  
     0.621
BF49_5501
Bll5160 protein.
  
     0.585
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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