STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1617FIG00442207 hypothetical protein. (125 aa)    
Predicted Functional Partners:
BF49_1619
Twocomponent sensor histidine kinase.
 
     0.806
BF49_1618
FIG00442417 hypothetical protein.
       0.752
BF49_2234
COG1896 Predicted hydrolases of HD superfamily.
 
     0.716
BF49_0558
SAMdependent methyltransferase 2 in cluster with Hydroxyacylglutathione hydrolase EC 3126.
 
     0.684
BF49_0264
Hypothetical protein.
  
     0.671
BF49_3395
FIG00450379 hypothetical protein.
  
     0.638
BF49_3472
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
 
     0.629
BF49_4268
THIOdisulfide Interchange Protein.
  
     0.607
BF49_2277
Glycosyl transferase group 2 family protein.
  
     0.597
BF49_3082
FIG00741453 hypothetical protein.
  
     0.596
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.