Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1621Sulfur acceptor protein SufE for ironsulfur cluster assembly. (143 aa)    
Predicted Functional Partners:
BF49_0717
Cysteine desulfurase EC 2817 SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.961
BF49_0720
Ironsulfur cluster assembly protein SufB.
 
 
 0.921
BF49_0719
Ironsulfur cluster assembly ATPase protein SufC.
 
 
 0.909
BF49_0718
Ironsulfur cluster assembly protein SufD.
 
 
 0.908
BF49_6806
Cysteine desulfurase EC 2817.
  
 0.893
BF49_5784
Bll5850 protein.
  
 0.854
BF49_5794
Bll5850 protein.
  
 0.854
BF49_0721
Cysteine desulfurase EC 2817.
    
 0.690
BF49_1620
FIG00440661 hypothetical protein.
       0.661
BF49_1111
Cysteine desulfurase EC 2817.
    
 0.654
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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