Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1624Bll3066 protein. (549 aa)    
Predicted Functional Partners:
BF49_1623
Basic prolinerich protein precursor.
 
     0.871
BF49_6808
Serinethreonine protein kinase.
  
     0.636
BF49_3060
FIG00441555 hypothetical protein.
 
  
 0.632
BF49_6888
Putative beta 16 glucans synthase.
  
     0.576
BF49_6886
Beta13glucosyl transferase.
 
  
 0.567
BF49_6090
Hypothetical protein.
  
     0.536
BF49_0733
Large exoproteins involved in heme utilization or adhesion.
  
     0.516
BF49_1625
Ribulose5phosphate 4epimerase and related epimerases and aldolases.
       0.514
BF49_5180
FIG00439865 hypothetical protein.
 
    0.502
BF49_2441
Hypothetical protein.
  
     0.497
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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