STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1627FIG00852424 hypothetical protein. (442 aa)    
Predicted Functional Partners:
BF49_0472
Hypothetical protein.
  
   
 0.806
BF49_4070
FIG00443189 hypothetical protein.
 
   
 0.763
BF49_4813
Flagellar hooklength control protein FliK.
  
   
 0.762
BF49_3690
Conserved hypothetical protein putative signal peptide.
  
     0.759
BF49_3919
Hypothetical protein.
 
   
 0.759
BF49_7086
Hypothetical protein.
  
     0.759
BF49_3105
Putative Omethyl transferase.
  
   
 0.752
BF49_0241
FIG00440108 hypothetical protein.
 
     0.750
BF49_0986
Transcriptional regulator TetR family.
  
     0.743
truA
tRNA pseudouridine synthase A EC 42170; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.742
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.