STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1628ATPase component BioM of energizing module of biotin ECF transporter. (542 aa)    
Predicted Functional Partners:
BF49_1627
FIG00852424 hypothetical protein.
  
    0.606
BF49_2280
YpfJ protein zinc metalloprotease superfamily.
 
     0.510
BF49_1626
Acetylornithine deacetylaseSuccinyldiaminopimelate desuccinylase and related deacylases.
    
  0.494
BF49_1629
FIG069766 hypothetical protein.
       0.432
BF49_1630
FIG050708 hypothetical protein.
       0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.