Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1635Gfalike protein. (154 aa)    
Predicted Functional Partners:
BF49_1634
MethylmalonylCoA mutase EC 54992.
       0.853
BF49_1637
MethylmalonylCoA mutase EC 54992.
       0.827
BF49_1054
Gfalike protein.
  
     0.772
BF49_6142
Gfalike protein.
  
     0.763
BF49_1636
Hypothetical protein.
       0.762
BF49_1638
Bll3052 protein.
       0.717
BF49_3129
Gfalike protein.
  
     0.696
BF49_4050
FIG00441233 hypothetical protein.
  
     0.621
BF49_1631
Dihydropteroate synthase EC 25115; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.618
BF49_1632
Dihydroneopterin aldolase EC 41225; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.618
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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