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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1644LAO/AO transport system kinase; YgfD protein that forms a complex with the methylmalonylCoA mutase in a pathway for conversion of succinylCoA to propionylCoA. (327 aa)    
Predicted Functional Partners:
BF49_1637
MethylmalonylCoA mutase EC 54992.
 
 0.989
BF49_1634
MethylmalonylCoA mutase EC 54992.
 
 
 0.987
BF49_6655
MethylmalonylCoA epimerase EC 51991 EthylmalonylCoA epimerase.
 
 
 0.865
BF49_1645
Pyrrolidonecarboxylate peptidase EC 34193; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
       0.801
BF49_6277
PropionylCoA carboxylase beta chain EC 6413.
 
  
 0.792
BF49_1643
Hypothetical protein.
       0.705
BF49_1646
Bll3046 protein.
       0.575
BF49_4190
5methyltetrahydrofolatehomocysteine methyltransferase EC 21113; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.551
BF49_1119
PropionylCoA carboxylase beta chain EC 6413.
 
  
 0.532
BF49_0507
4hydroxyphenylpyruvate dioxygenase EC 1131127.
    
 0.497
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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