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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1648Serine protease precursor. (568 aa)    
Predicted Functional Partners:
BF49_1650
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.912
BF49_1649
FIG00440949 hypothetical protein.
     
 0.850
BF49_6683
Glycosyl hydrolase BNR repeat.
 
 
 0.505
BF49_2504
Hypothetical protein.
  
 
 0.458
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
 
  
 0.457
BF49_7226
FIG00440594 hypothetical protein.
  
 0.457
BF49_7157
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.449
BF49_5647
Asparagine synthetase glutaminehydrolyzing EC 6354.
  
  
 0.441
BF49_3572
FIG01200701 possible membrane protein.
  
 
 0.434
BF49_4411
FIG00853353 hypothetical protein.
  
 
 0.434
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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