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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1660FIG045511 hypothetical antitoxin to FIG022160 hypothetical toxin. (116 aa)    
Predicted Functional Partners:
BF49_1659
FIG022160 hypothetical toxin.
 
  
 0.924
BF49_1661
Unknown.
       0.620
BF49_1658
Type I secretion outer membrane protein TolC precursor.
       0.443
BF49_1663
Putative 2pyrone46dicarboxylic acid hydrolase.
       0.429
BF49_2366
VapB protein antitoxin to VapC; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.407
BF49_6265
Hypothetical protein.
 
     0.405
vapC-2
VapC toxin protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
     0.401
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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