Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_1663Putative 2pyrone46dicarboxylic acid hydrolase. (303 aa)    
Predicted Functional Partners:
BF49_4436
FIG00794837 hypothetical protein.
 
  
 0.768
BF49_1199
4carboxy4hydroxy2oxoadipate aldolase EC 41317.
 
   
 0.733
BF49_1196
3hydroxyisobutyrate dehydrogenase and related betahydroxyacid dehydrogenases.
 
     0.636
BF49_1197
3hydroxyisobutyrate dehydrogenase and related betahydroxyacid dehydrogenases.
 
     0.635
BF49_1200
4oxalmesaconate hydratase EC 42183.
 
     0.546
BF49_1661
Unknown.
       0.535
BF49_0648
Dimethylmenaquinone methyltransferase family protein.
 
   
 0.522
BF49_1198
45dihydroxyphthalate decarboxylase EC 41155.
  
     0.470
BF49_1390
Alcohol dehydrogenase EC 1111.
  
  
  0.463
BF49_1660
FIG045511 hypothetical antitoxin to FIG022160 hypothetical toxin.
       0.429
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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