Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1672Biotin synthase related domain containing protein. (411 aa)    
Predicted Functional Partners:
BF49_1673
Domain often clustered or fused with uracilDNA glycosylase UracilDNA glycosylase putative family 6.
 
  
 0.963
BF49_1671
Errorprone repair protein ImuA.
       0.583
BF49_1674
Lowaffinity inorganic phosphate transporter.
       0.577
guaB
Inosine5monophosphate dehydrogenase EC 111205 CBS domain; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
    0.504
BF49_1670
DNA polymeraselike protein PA0670.
       0.504
dnaE2
DNA polymerase III alpha subunit EC 2777; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.496
BF49_0332
Pyridoxamine 5phosphate oxidase EC 1435.
 
     0.494
hemE
Uroporphyrinogen III decarboxylase EC 41137; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
     
  0.464
BF49_0312
Twocomponent response regulator.
  
     0.410
BF49_3982
mRNA 3end processing factor.
 
     0.406
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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