STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1673Domain often clustered or fused with uracilDNA glycosylase UracilDNA glycosylase putative family 6. (480 aa)    
Predicted Functional Partners:
BF49_1672
Biotin synthase related domain containing protein.
 
  
 0.951
BF49_6507
UracilDNA glycosylase family 5.
  
  
 0.943
BF49_2268
UracilDNA glycosylase family 4.
  
  
0.923
BF49_1671
Errorprone repair protein ImuA.
  
    0.582
BF49_6829
Singlestranded DNAbinding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.548
BF49_1674
Lowaffinity inorganic phosphate transporter.
       0.547
gpmA
Phosphoglycerate mutase EC 5421; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.546
BF49_0027
TsaB protein required for threonylcarbamoyladenosine t6A formation in tRNA.
  
    0.536
BF49_7352
TsaB protein required for threonylcarbamoyladenosine t6A formation in tRNA.
  
    0.536
BF49_1670
DNA polymeraselike protein PA0670.
     
 0.534
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.