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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1676Choline dehydrogenase EC 11991. (539 aa)    
Predicted Functional Partners:
BF49_4189
Hypothetical protein.
    
 0.651
BF49_1638
Bll3052 protein.
    
 0.552
BF49_3193
Highaffnity carbon uptake protein HatHatR.
    
 0.552
BF49_1675
NacetylLLdiaminopimelate deacetylase EC 35147.
       0.506
BF49_1280
Similar to flavohemoprotein.
    
 0.498
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
    
 0.495
BF49_0432
Sulfatase family protein EC 313.
    
 0.474
BF49_1677
Bll3016 hypothetical protein.
       0.451
BF49_5306
TPR repeat.
  
 0.449
BF49_1272
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
  
 
 0.444
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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