STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1678Copper binding protein plastocyaninazurin family. (111 aa)    
Predicted Functional Partners:
BF49_1677
Bll3016 hypothetical protein.
 
   
 0.876
BF49_1680
Putative transmembrane antisigma factor.
 
     0.732
BF49_2228
FIG01075795 hypothetical protein.
 
     0.558
BF49_0870
Multicopper oxidase.
   
 
 0.511
BF49_2719
Multicopper oxidase.
   
 
 0.511
BF49_4443
Coppercontaining nitrite reductase EC 1721; Belongs to the multicopper oxidase family.
   
 
 0.511
BF49_6613
Multicopper oxidase.
   
 
 0.511
BF49_1679
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.487
BF49_2307
Ubiquinolcytochrome C reductase ironsulfur subunit EC 11022; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.460
BF49_5349
Ubiquinolcytochrome C reductase ironsulfur subunit EC 11022.
  
 0.460
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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