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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1683Hopanoidassociated RND transporter HpnN. (862 aa)    
Predicted Functional Partners:
BF49_1685
Radical SAM protein required for addition of adenosine to hopane skeleton HpnH.
 
   
 0.815
BF49_1687
5methylthioadenosine nucleosidase EC 32216 Sadenosylhomocysteine nucleosidase EC 3229.
 
     0.798
BF49_1688
Squalenehopene cyclase EC 549917.
 
     0.797
BF49_1689
Phytoene desaturase EC 11499.
  
     0.739
BF49_1690
Phytoene synthase EC 25132.
 
     0.636
BF49_5100
Dihydroflavonol4reductase EC 111219.
  
   
 0.612
BF49_1691
Phytoene synthase EC 25132.
 
     0.580
BF49_1681
Acetylornithine aminotransferase EC 26111; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.541
BF49_6684
Possible signal peptide protein.
 
     0.477
BF49_1757
Probable CoZnCd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.474
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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