STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1689Phytoene desaturase EC 11499. (417 aa)    
Predicted Functional Partners:
BF49_1690
Phytoene synthase EC 25132.
 
 0.989
BF49_1691
Phytoene synthase EC 25132.
 
 
 0.985
BF49_1688
Squalenehopene cyclase EC 549917.
 
   
 0.937
BF49_1687
5methylthioadenosine nucleosidase EC 32216 Sadenosylhomocysteine nucleosidase EC 3229.
 
     0.904
BF49_1685
Radical SAM protein required for addition of adenosine to hopane skeleton HpnH.
 
  
 0.757
BF49_1683
Hopanoidassociated RND transporter HpnN.
  
     0.739
BF49_5072
Phytoene dehydrogenase EC 11499.
    
 0.685
BF49_6804
Phytoene synthase EC 25132.
 
 
 0.634
BF49_2267
Electron transfer flavoproteinubiquinone oxidoreductase EC 1551; Accepts electrons from ETF and reduces ubiquinone.
    
 0.616
BF49_5100
Dihydroflavonol4reductase EC 111219.
 
  
  0.564
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.