Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1704IsovalerylCoA dehydrogenase EC 1384. (409 aa)    
Predicted Functional Partners:
BF49_6177
Bll5454 hypothetical protein.
   0.978
BF49_6182
Bll5454 hypothetical protein.
   0.978
BF49_2373
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 0.940
BF49_3997
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase isoleucine degradation EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 0.940
BF49_2111
GlutarylCoA dehydrogenase EC 13997.
  
  
 
0.905
BF49_4171
3-hydroxyacyl-CoA dehydrogenase; EnoylCoA hydratase EC 42117 Delta3cisdelta2transenoylCoA isomerase EC 5338 3hydroxyacylCoA dehydrogenase EC 11135; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.861
BF49_2374
3ketoacylCoA thiolase EC 23116 AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.844
BF49_0553
AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.815
BF49_1103
3ketoacylCoA thiolase EC 23116 AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.815
BF49_1131
3ketoacylCoA thiolase EC 23116; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.815
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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