STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1707HDED PROTEIN. (191 aa)    
Predicted Functional Partners:
BF49_3408
Mg2 transport ATPase protein C.
  
  
 0.796
BF49_3192
Mg2 transport ATPase protein C.
  
  
 0.731
BF49_1705
COGs COG0683.
 
     0.571
BF49_2003
Protein of unknown function DUF900 hydrolase family protein.
  
     0.541
BF49_1708
Ferredoxin reductase.
       0.504
BF49_6335
Putative outermembrane immunogenic protein precursor.
  
     0.479
BF49_5786
Bll5848 putative decarboxylase.
   
  
 0.473
BF49_5796
Bll5848 putative decarboxylase.
   
  
 0.473
BF49_1704
IsovalerylCoA dehydrogenase EC 1384.
  
 
  0.459
folE
GTP cyclohydrolase I EC 35416 type 1.
       0.455
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.