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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1710Epoxide hydrolase EC 3329. (296 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 0.830
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
   
 0.719
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.642
BF49_0605
Hypothetical protein.
    
 0.555
folE
GTP cyclohydrolase I EC 35416 type 1.
       0.497
BF49_3169
Probable signal peptide protein.
  
     0.493
BF49_6759
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.493
BF49_5320
Epoxide hydrolase EC 3329.
  
     0.485
BF49_0676
Putative secreted protein.
  
  
 0.482
BF49_1708
Ferredoxin reductase.
     
 0.475
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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