STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1721Homoprotocatechuate degradative operon repressor. (157 aa)    
Predicted Functional Partners:
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
 
   
 0.886
BF49_1722
2oxohepta3ene17dioic acid hydratase EC 42.
 
     0.827
BF49_2116
34dihydroxyphenylacetate 23dioxygenase EC 1131115.
 
   
 0.729
BF49_3412
2oxohepta3ene17dioic acid hydratase EC 42.
 
     0.638
BF49_1725
34dihydroxyphenylacetate 23dioxygenase HpaD EC 113112.
 
   
 0.625
BF49_1724
5carboxymethyl2hydroxymuconate semialdehyde dehydrogenase EC 12160; Belongs to the aldehyde dehydrogenase family.
 
   
 0.590
BF49_1720
Hypothetical oxidoreductase YbiC homolog; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.516
BF49_5181
Lproline glycine betaine binding ABC transporter protein ProX TC 3A1121 Osmotic adaptation.
  
  
 0.484
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.