Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_17245carboxymethyl2hydroxymuconate semialdehyde dehydrogenase EC 12160; Belongs to the aldehyde dehydrogenase family. (512 aa)    
Predicted Functional Partners:
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
 
 
 0.996
BF49_2116
34dihydroxyphenylacetate 23dioxygenase EC 1131115.
 
 
 0.950
BF49_1725
34dihydroxyphenylacetate 23dioxygenase HpaD EC 113112.
 
 0.937
fmt
MethionyltRNA formyltransferase EC 2129; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.838
BF49_1722
2oxohepta3ene17dioic acid hydratase EC 42.
 
  
 0.819
BF49_6759
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.683
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.674
BF49_1719
24dihydroxyhept2ene17dioic acid aldolase EC 412n4; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.673
BF49_6971
Hypothetical protein.
  
 0.669
BF49_5845
Fumarate hydratase class I aerobic EC 4212; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.631
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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