Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_172534dihydroxyphenylacetate 23dioxygenase HpaD EC 113112. (327 aa)    
Predicted Functional Partners:
BF49_1724
5carboxymethyl2hydroxymuconate semialdehyde dehydrogenase EC 12160; Belongs to the aldehyde dehydrogenase family.
 
 0.937
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
 
   
 0.893
BF49_1722
2oxohepta3ene17dioic acid hydratase EC 42.
 
   
 0.873
BF49_3412
2oxohepta3ene17dioic acid hydratase EC 42.
 
   
 0.777
BF49_2647
2keto4pentenoate hydratase EC 42180.
 
   
 0.689
BF49_5812
2oxohepta3ene17dioic acid hydratase EC 42.
 
   
 0.688
BF49_0224
2keto4pentenoate hydratase EC 42180.
 
   
 0.640
BF49_1721
Homoprotocatechuate degradative operon repressor.
 
     0.624
BF49_1726
2hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168.
 
   
 0.609
BF49_1634
MethylmalonylCoA mutase EC 54992.
    
 0.594
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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