STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_172534dihydroxyphenylacetate 23dioxygenase HpaD EC 113112. (327 aa)    
Predicted Functional Partners:
BF49_1724
5carboxymethyl2hydroxymuconate semialdehyde dehydrogenase EC 12160; Belongs to the aldehyde dehydrogenase family.
 
 
 0.942
BF49_1227
Catechol 23dioxygenase EC 113112.
  
  
 
0.925
BF49_0830
Salicylate hydroxylase EC 114131.
 
  
 0.910
BF49_2811
Glyoxalase family protein.
  
 
 0.905
BF49_6368
FIG00445122 hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family.
  
 
 0.905
BF49_7169
Glyoxalase family protein.
  
 
 0.905
BF49_2990
Probable tautomerase bsl7456 EC 532; Belongs to the 4-oxalocrotonate tautomerase family.
  
 
 0.904
BF49_7260
Catechol 12dioxygenase EC 113111.
     
 0.903
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
 
  
 0.893
BF49_1722
2oxohepta3ene17dioic acid hydratase EC 42.
 
   
 0.871
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.