STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1729Alkylated DNA repair protein AlkB. (216 aa)    
Predicted Functional Partners:
BF49_1730
FIG00443816 hypothetical protein.
 
     0.852
BF49_1728
FIG01008325 hypothetical protein.
       0.624
BF49_1731
FIG01006931 hypothetical protein.
 
     0.578
BF49_0254
2dehydropantoate 2reductase EC 111169; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.528
BF49_0645
2dehydropantoate 2reductase EC 111169; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.528
BF49_1537
2dehydropantoate 2reductase EC 111169.
   
    0.528
BF49_2171
FIG00443980 hypothetical protein.
   
    0.528
BF49_2176
FIG00443980 hypothetical protein.
   
    0.528
BF49_3528
2dehydropantoate 2reductase EC 111169.
   
    0.528
BF49_4782
FIG00443980 hypothetical protein.
   
    0.528
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.